Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816921.1_cds_XP_016499020.1_12987
CDS Infomation

[gene=LOC107817669] [db_xref=GeneID:107817669] [protein=pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like] [protein_id=XP_016499020.1] [location=complement(3592..4992)] [gbkey=CDS]
Sequence

ATGGGGTTTGGATTTGATGTATTTGTGCAAAATGCATTGGTTTATATGTATTTCCAGTGC
GGGGTTATTGAGTTTGCACAGAAGGTATTTGAATATATGCCTGACTCAGTTCGAGATGTT
GTCACTTGGAATAGTATGATTTCTGGGTATTTACAATGTGGGTTTTGTCATCAAGCAGTG
AAAATGTTTGGAAAATTGTTGCTCAGAAGTGGTGTGAGGTTGAATGATGTAAGTATCGTG
AGTGCTCTTACAGCGTGTGCAAGAACTGGGTTGCTTGATTTGGGGAAGAAGATTCATGGG
TTGATTGTTGTTTATGGGCTTGTGATTGATGTCTTTCTGGGTTCTTCTTTAGTTGACATG
TACACAAAATGTGGGCGGTTAGAGGATGCTAGAAAGGTTTTTGATAGATTGTTAGATAAA
AATGCAGTCTGTTGGACTTCTATGATTGCAGGTTATTTGCAATCGGACATGTTTAAGGAA
GCAATAGAGCTATTTAGGGAGATGCAGATGGCTGGGGTTAAGGCCGAACCTGCCACAATT
GCTTGTGTTGCTTCTGCATGTGGGCATTTGGGTGCACTAGTTTTGGGAAGGTGGGTGCAT
AATTATTGTGAAAAGAGTGGTATTGAAATGAACCTTGTAGTGAAGAATTCTTTGATTGAT
ATGTACTCTAAATGTGGATTAGTTGATAAGGCTCTTGAAGTTTTTTATTTGTTAAGTAAT
AAGGATGTTTATTCGTGGAGTATGATGATTTCTGGGCTAGCTATGAATGCAAGATCCGAT
GAGGCTTTGCAATTATTTTCACTAATGGAAGGATCAAGTGGAGTAAGGCCAAATGGCGTA
ACATTTCTTGGGATCTTATCTGCCTGTAGTCATGGTGGGTGTGTTGGTGACGGGTTTTAC
TACTTTGAGAAGATGACCGGGCAATACAAATTGTCCCCCGGGGTTGAGCACTATGGCTGC
CTGGTTGATCTTTTGGGCCGTGCAAATCTTGTTGTTGAGGCTATGGAGTTCATCCGTTAT
ATGCCCACTCAGCCAGATGCTATCATTTGGCGATCCTTGCTTTTCGCGGGTAGTAGACAC
GGAAATGTAGAGTTGGCGGAAGTTGCTGCCAAAAAGATTAGTGAATTGGAGCCAGAGAAA
TGTGGGGCACATGTGCTGCTGTCTAATGCTTATGCCTCTGCATCTAGGTGGAAGGATGTG
AGAATGGTAAGGAGGAATATGGGTGCTGAGGGAATCCAGAAGCAACCTGGATGTTCTTTT
ATTGAAATAGATGGTTCTGTTCATGAATTTCTTGTTGCTGATAGCGTACACTGTCAGATT
GATGTCATATGCAATACACTTCAAGCAATGAATGTAGTTCTTAAATCAAGAGTATTTGAG
CTTGATTTTCTGGATTACTAG

Peptide Sequence

PEP ID

XP_016499020.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Nicotiana tabacum]
Sequence

MGFGFDVFVQNALVYMYFQCGVIEFAQKVFEYMPDSVRDVVTWNSMISGYLQCGFCHQAV
KMFGKLLLRSGVRLNDVSIVSALTACARTGLLDLGKKIHGLIVVYGLVIDVFLGSSLVDM
YTKCGRLEDARKVFDRLLDKNAVCWTSMIAGYLQSDMFKEAIELFREMQMAGVKAEPATI
ACVASACGHLGALVLGRWVHNYCEKSGIEMNLVVKNSLIDMYSKCGLVDKALEVFYLLSN
KDVYSWSMMISGLAMNARSDEALQLFSLMEGSSGVRPNGVTFLGILSACSHGGCVGDGFY
YFEKMTGQYKLSPGVEHYGCLVDLLGRANLVVEAMEFIRYMPTQPDAIIWRSLLFAGSRH
GNVELAEVAAKKISELEPEKCGAHVLLSNAYASASRWKDVRMVRRNMGAEGIQKQPGCSF
IEIDGSVHEFLVADSVHCQIDVICNTLQAMNVVLKSRVFELDFLDY

Transcript Sequence

Gene sequence data has not been registered.